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G

gdt2D(Object, int, int, float, float, String, String, int[], int[]) - Method in class jhd.FloodFill.GDT3D

2D Geodesic distance mapper

gdt3D(Object[], int, int, int, float, float, float, String, String, int[], int[], int[]) - Method in class jhd.FloodFill.GDT3D

3D Geodesic distance by distance propagation

GDT3D - Class in jhd.FloodFill

Methods for 2D and 3D Geodesic transform and tortousity

GDT3D() - Constructor for class jhd.FloodFill.GDT3D

Default Constructor

get1dOffsets2D(int, int) - Static method in class jhd.FloodFill.Offsets

Get the absolute 1D offsets of pixels surrounding a 2D central pixel

get1dOffsets2D(int, int, double, double) - Static method in class jhd.FloodFill.Offsets

Get the absolute 1D offsets and center-to-center distances of pixels surrounding a 2D central pixel, pixel units must be the same

get1dOffsets3D(int, int, int) - Static method in class jhd.FloodFill.Offsets

Get the absolute 1D offsets of voxels surrounding a 3D central voxel

get1dOffsets3D(int, int, int, double, double, double) - Static method in class jhd.FloodFill.Offsets

Get the absolute 1D offsets and center-to-center distances of voxels surrounding a central voxel, voxel units must be the same

GetConnectivityChoices() - Static method in class jhd.FloodFill.Offsets

GetConnectivityValue(String) - Static method in class jhd.FloodFill.Offsets

getGeoPath2D(Object, int, int, Offsets.PointDesc) - Method in class jhd.FloodFill.GDT3D

Finds the shortest path through a 2D GDT image between a probePoint and the GDT origin.

getGeoPath3D(Object[], int, int, int, Offsets.PointDesc) - Method in class jhd.FloodFill.GDT3D

Finds the shortest path through a 2D GDT image between a probePoint and the GDT origin.

getGeoPaths2D(Object, int, int, ArrayList<Offsets.PointDesc>) - Method in class jhd.FloodFill.GDT3D

Finds the shortest path through a 2D GDT image between each probePoint and the GDT origin.

getGeoPaths3D(Object[], int, int, int, ArrayList<Offsets.PointDesc>) - Method in class jhd.FloodFill.GDT3D

Finds the shortest path through a 2D GDT image between each probePoint and the GDT origin.

getIndexOffsets2D() - Static method in class jhd.FloodFill.Offsets

Get the index offsets of pixels surrounding a 2D central pixel, eg offset(-1,0) is to the left, if the central pixel is (27,32) the one to the left is(26,32)

getIndexOffsets2D(double, double) - Static method in class jhd.FloodFill.Offsets

Get the index offsets and distance of pixels surrounding a central pixel, eg offset(-1,-1) is (left,up) , if the central pixel is (27,32) the one to the left,up is(26,31) and the distance is √ pixWidth² + pixHeight², voxel units must be the same.

getIndexOffsets3D() - Static method in class jhd.FloodFill.Offsets

Get the index offsets of voxels surrounding a central voxel, eg offset(-1,-1,-1) (left,up,forward), if the voxel pixel is (27,32,57) the one to the left,up,forward is(26,31,56)

getIndexOffsets3D(double, double, double) - Static method in class jhd.FloodFill.Offsets

Get the index offsets and distance of voxels surrounding a central voxel, eg offset(-1,-1,-1) (left,up,forward), if the voxel pixel is (27,32,57) the one to the left,up,forward is(26,31,56) and the distance is √ pixWidth² + pixHeight² + pixDepth² , voxel units must be the same.

getMapChoices() - Method in class jhd.FloodFill.ExactEuclideanMap

Used to make dialogs.

getMapChoices() - Method in class jhd.FloodFill.GDT3D

Used to build Dialogs

getSeedChoices2D() - Method in class jhd.FloodFill.GDT3D

Used to build Dialogs

getSeedChoices3D() - Method in class jhd.FloodFill.GDT3D

Used to build Dialogs

grayFloodFill3D(Object[], int, int, int, int, double, double, double, List<Offsets.PointDesc>) - Method in class jhd.FloodFill.FloodFill

Flood fill 3D image voxel values between floodMin and floodMax with a fillVal

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