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FloodTools- A collection of DistanceMapLib-based ImageJ plugins implement the distance transforms and model non-wetting invasion percolation. All methods support asymmetric pixels/voxel sizes and physical dimensions.

• Exact Euclidean - Exact Euclidean distance map of 2D and 3D segmented images using Danielsson's algorithm.
• Euclidean Spheres - Draw single and multiple Euclidean spheres.
• Geodesic Transform - Geodesic distances, tortuosity and shortest path plugins for 2D and 3D segmented images using distance propagation
• FloodFill 3D - A simple gray scale flooder.
• Porosity To Hybrid - Converts a porosity image to a hybrid porosity image.
• HybridFlood - Geometry based simulation of non-wetting imbibition in an image of a random porous medium.
• HybridFlood Search and Scan - Bisection Search to find the "Breakthrough" pore radius or "Breakthrough" porosity in an image of a random porous medium, or flooded volume by scanning at fixed radius steps.
• Add Pore Liner - Lines all resolved pores with a layer of unresolved porosity.
• Installation: Flood_Tools bundled with DistanceLib
  1. Download ImageJ_Flood_ToolsBundle_Java8.jar to the ImageJ/plugins folder.
  2. Launch ImageJ